Mahnaz Habibi
PhD, Mathematics, Applicatory Combination
Bioinformatics Research Group, School of Computer Science, Institute for Studies in Theoretical Physics and Mathematics (IPM)
Email:
Habibi@bioinfomics-ir.com
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Education
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| 1995-1999 |
B.Sc., Mathematics, Pure, Tecnology of Shahrood University, Shahrood, Iran
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| 2003-2005 |
M.Sc., Mathematics, Pure, Tecnology of Shahrood University, Shahrood, Iran
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| 2006-2010 |
Ph.D., Mathematics, Applicatory Combination, Shahid Beheshti University, Tehran, Iran |
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Areas of Research Interests
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| Discrete Mathematics and Theoretical Computer Science |
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Graph Theory and Applications
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Algorithms and Approximation Algorithms
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Bioinformatics |
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Analysis of Protein Structure
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Analysis of Protein-Protein Interaction Network
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Protein Complex Prediction
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Protein Function Prediction
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Phylogenetic Network
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Publications
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1- Habibi, M., Eslahchi C., Pezeshk H., Sadeghi M., An Information theoritical Approch to Secondary Structure Assignment. MATCH Communications in Mathematical and in Computer Chemistry, 2011, 65(1).
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2- Habibi, M., Eslahchi C., Wong L., Protein complex prediction based on k-connected subgraph in protein interaction network, BMC System Biology, 2010, 4:129
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3- Eslahchi, C., Habibi M., Hassanzadeh, R., Mottaghi, E., MC-Net: A Monte-Carlo Method for the Construction of Phylogenetic Network based on Monte Carlo method, BMC Evolutionary Biology 2010, 10:25
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4- Habibi, M., Eslahchi C., Sadeghi M., Pezeshk H., The interpretation of protein structures based on graph theory and contact map, Open Access Bioinformatics, 2010, 2: 1-11
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5- Hosseini S. R., Sadeghi, M., Pezeshk H., Eslahchi C., Habibi, M., PROSIGN: A Method for Protein Secondary Structure Assignment Based on Three-Dimensional Coordinates of Consecutive Ca atoms. Computational Biology and Chemistry 2008, 32, 6: 406-411.
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6- Habibi, M., Eslahchi C., Pezeshk H., Sadeghi M. A Theoretical Approach to Secondary Structure Assignment, Journal of Science, University of Tehran 2008, 34, 3, 41-48.
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Presentations
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1- Hosseini S. R., Sadeghi, M., Pezeshk H., Eslahchi C., Habibi, M., A method for protein secondary structure assignment based on three-dimensional coordinates, The Fifth National Biotechnology Congress of Iran. 24-26 Nov. 2007, Summit Meeting Conference Hall, Tehran, Iran.
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2- Habibi, M., Sadeghi M., Pezeshk, H., Eslahchi, C. The Interpretation of Protein Structures Based on Graph Theory and Contact Map: Packing Density, Hydrophobic Cores and Molecular Surface Area. The 2nd Iranian Conference on Bioinformatics, 8-9 October 2008, Institute of Biochemistry and Biophysics (IBB), University of Tehran, Tehran, Iran.
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3- Habibi, M., Hassanzadeh, R., Mottaghi, E., Eslahchi, CH. MC-Net: A Monte-Carlo Method for the Construction of Phylogenetic Network, Proceeding of the 4th International Conference on Research and Education in Mathematics, UPM, Malaysia, 2009, 563-570.
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